PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00887g01035.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 359aa    MW: 39270.6 Da    PI: 4.9156
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00887g01035.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.53.3e-051481693455
                               TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  34 pskKlsKaeiLekAveYIksLq 55 
                               ++   +Ka++L +A+eY+k+Lq
  Peinf101Scf00887g01035.1 148 RAAETDKASMLDEAIEYLKQLQ 169
                               566789***************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.1E-6148179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-6150190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.26E-4152173No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MANNNMYHHN ASSSFSWTEP DHEPDDISVF VRQILRPSSS SSSNFMNMKG SEMQYSSSLP  60
NLLSKNQHGL ESCSMLNTSS GNILSSFSGA YNIPTGVVNV CSSSVGTMDN DLDEYECESE  120
GGTEDFVVEA SGQQPSSSSS RNSSKRSRAA ETDKASMLDE AIEYLKQLQL QVQMLTMKNG  180
LFPLGLPRVL QQNQLSQQRM GLCEGDGFMK DNVASALHVN QDTSLKAIFS PSNNCTETKL  240
TPVATMANVN LHNAFESESS INTHLDPFQL SRNSKIKILA YILTSFAFDP GAHVASLAPF  300
DTNASNLKSN TLEACLHRYQ LGALNETNMD CDQLLAPHLY SHVGRSTSVD IIKNECSNF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009783822.11e-149PREDICTED: transcription factor SPATULA-like isoform X1
RefseqXP_016464627.11e-149PREDICTED: transcription factor SPATULA-like isoform X1
TrEMBLK4BDC41e-127K4BDC4_SOLLC; Uncharacterized protein
STRINGSolyc02g093280.2.11e-127(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA98502227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.17e-17bHLH family protein